SNP Profiles matching B 12/1 [POU]

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_Input profile	TT	CC	CC	GT	CT	GG	AA	CC	AA	CC	GG	GG	TT	CC
1._B_12_/1_[POU]	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
2._B_12_/1_[POU]	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
3._B_12_/1_[POU]	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
4._B_12_/1_[POU]	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
5._PA_121_[PER]	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
6._B_12_/1_[POU]	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
7._B_12_/1_[POU]	_	_	CC	GT	_	_	AA	CC	AA	CC	_	_	TT	_
8._RUQ_1541	_	_	CC	GT	CT	_	AA	CC	AA	CC	_	_	TT	_
9._GC-05-093-2-44	TT	CC	CC	GT	CT	GG	AA	CC	AA	CC	GG	GG	TT	CC
10._GC-05-093-2-44	TT	CC	CC	GT	CT	GG	AA	CC	AA	CC	GG	GG	TT	CC
11._GC-05-093-2-44	TT	CC	CC	GT	CT	GG	AA	CC	AA	CC	GG	GG	TT	CC
12._GC-05-011-1-11	TT	CC	CC	GT	CT	GG	AA	CC	AA	CC	GG	GG	TT	CC
13._GC-05-093-2-44	TT	CC	CC	GT	CT	GG	AA	CC	AA	CC	GG	GG	TT	CC
14._GC-05-093-2-44	TT	CC	CC	GT	_	GG	AA	CC	AA	CC	GG	GG	TT	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG
1._B_12_/1_[POU]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
2._B_12_/1_[POU]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
3._B_12_/1_[POU]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
4._B_12_/1_[POU]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
5._PA_121_[PER]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
6._B_12_/1_[POU]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
7._B_12_/1_[POU]	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
8._RUQ_1541	AA	CC	CT	GT	GG	CC	_	CC	_	GT	_	_	_	GG
9._GC-05-093-2-44	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG
10._GC-05-093-2-44	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG
11._GC-05-093-2-44	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG
12._GC-05-011-1-11	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG
13._GC-05-093-2-44	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG
14._GC-05-093-2-44	AA	CC	CT	GT	GG	CC	CT	CC	TT	GT	AG	TT	CC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	TT	AG	CC	CC	TT	AG	AT	GT	CT	TT	CT	CG	GG
1._B_12_/1_[POU]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
2._B_12_/1_[POU]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
3._B_12_/1_[POU]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
4._B_12_/1_[POU]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
5._PA_121_[PER]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
6._B_12_/1_[POU]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
7._B_12_/1_[POU]	_	TT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
8._RUQ_1541	_	CT	AG	_	CC	_	_	_	GT	_	_	CT	CG	GG
9._GC-05-093-2-44	GG	TT	AG	CT	CC	TT	AG	AT	GT	TT	TT	CT	CG	GG
10._GC-05-093-2-44	GG	TT	AG	CT	CC	TT	AG	AT	GT	TT	TT	CT	CG	GG
11._GC-05-093-2-44	GG	TT	AG	CT	CC	TT	AG	AT	GT	TT	TT	CT	CG	GG
12._GC-05-011-1-11	GG	TT	AG	CT	CC	TT	AG	AT	GT	TT	TT	CT	CG	GG
13._GC-05-093-2-44	GG	TT	AG	CT	CC	_	AG	AT	GT	TT	TT	CT	CG	GG
14._GC-05-093-2-44	GG	TT	AG	CT	CC	TT	AG	AT	GT	TT	TT	CT	CG	GG

Input profile: B_12_/1_[POU] RUQ_1541

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._B_12_/1_[POU]

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 1 > FP

Dapeng Zhang, 2016

2._B_12_/1_[POU]

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 5

Dapeng Zhang, 2016

3._B_12_/1_[POU]

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 4

Dapeng Zhang, 2016

4._B_12_/1_[POU]

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 2

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

5._PA_121_[PER]

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5111 2 > FP

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

6._B_12_/1_[POU]

identical
24 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F461 T10

Dapeng Zhang, 2016

7._B_12_/1_[POU]

identical
23 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 3

Dapeng Zhang, 2016

8._B_12_/1_[POU] RUQ_1541

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

9._B_12_/1_[POU] GC-05-093-2-44

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

10._B_12_/1_[POU] GC-05-093-2-44

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

11._B_12_/1_[POU] GC-05-093-2-44

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

12._PA_121_[PER] GC-05-011-1-11

97.6 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP4

13._B_12_/1_[POU] GC-05-093-2-44

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

14._B_12_/1_[POU] GC-05-093-2-44

97.6 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484